Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Gm25406-201ENSMUST00000157599 105 ntBASIC14.26□□□□□ -0.13
Vps9d1Q8C190 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vps9d1Q8C190 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Efs-202ENSMUST00000227037 2540 ntBASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vps9d1Q8C190 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.24□□□□□ -0.13
Vps9d1Q8C190 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps9d1Q8C190 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps9d1Q8C190 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps9d1Q8C190 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps9d1Q8C190 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps9d1Q8C190 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Vps9d1Q8C190 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps9d1Q8C190 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Vps9d1Q8C190 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps9d1Q8C190 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps9d1Q8C190 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms