Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Smco3Q8BQM7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Gm13474-201ENSMUST00000122466 815 ntBASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.56□□□□□ -0.4
Smco3Q8BQM7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Gm10566-201ENSMUST00000086739 996 ntBASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Smco3Q8BQM7 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Smco3Q8BQM7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smco3Q8BQM7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms