Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk3bQ80YF6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Rprl3-201ENSMUST00000157400 290 ntBASIC12.86□□□□□ -0.35
Upk3bQ80YF6 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Upk3bQ80YF6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Upk3bQ80YF6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.85□□□□□ -0.35
Upk3bQ80YF6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms