Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Gm4459-201ENSMUST00000118750 468 ntBASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Gm12644-201ENSMUST00000119935 606 ntBASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Gm9172-201ENSMUST00000212092 954 ntBASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Gm18669-201ENSMUST00000216049 778 ntBASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Otub1Q7TQI3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Otub1Q7TQI3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Otub1Q7TQI3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Otub1Q7TQI3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Otub1Q7TQI3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.48□□□□□ -0.09
Otub1Q7TQI3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.48□□□□□ -0.09
Otub1Q7TQI3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Otub1Q7TQI3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.48□□□□□ -0.09
Otub1Q7TQI3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Otub1Q7TQI3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Otub1Q7TQI3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Otub1Q7TQI3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Otub1Q7TQI3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Otub1Q7TQI3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Otub1Q7TQI3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Otub1Q7TQI3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Otub1Q7TQI3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Otub1Q7TQI3 BC037039-201ENSMUST00000192003 2205 ntBASIC14.47□□□□□ -0.09
Otub1Q7TQI3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otub1Q7TQI3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otub1Q7TQI3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otub1Q7TQI3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otub1Q7TQI3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.47□□□□□ -0.09
Otub1Q7TQI3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otub1Q7TQI3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otub1Q7TQI3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otub1Q7TQI3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otub1Q7TQI3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otub1Q7TQI3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otub1Q7TQI3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otub1Q7TQI3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Otub1Q7TQI3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms