Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Gm13436-201ENSMUST00000120418 567 ntBASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Rfx4Q7TNK1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Gm37055-201ENSMUST00000191866 133 ntBASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Rfx4Q7TNK1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Gm25406-201ENSMUST00000157599 105 ntBASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
Rfx4Q7TNK1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rfx4Q7TNK1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms