Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Vma21Q78T54 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.4□□□□□ -0.42
Vma21Q78T54 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.4□□□□□ -0.42
Vma21Q78T54 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.4□□□□□ -0.42
Vma21Q78T54 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.4□□□□□ -0.42
Vma21Q78T54 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.4□□□□□ -0.42
Vma21Q78T54 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.4□□□□□ -0.42
Vma21Q78T54 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.4□□□□□ -0.42
Vma21Q78T54 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Vma21Q78T54 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Vma21Q78T54 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Vma21Q78T54 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vma21Q78T54 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Vma21Q78T54 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Vma21Q78T54 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.43
Vma21Q78T54 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.39□□□□□ -0.43
Vma21Q78T54 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vma21Q78T54 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Vma21Q78T54 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Vma21Q78T54 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vma21Q78T54 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vma21Q78T54 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vma21Q78T54 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vma21Q78T54 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Gm8344-201ENSMUST00000119813 856 ntBASIC12.39□□□□□ -0.43
Vma21Q78T54 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Vma21Q78T54 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Vma21Q78T54 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Vma21Q78T54 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.39□□□□□ -0.43
Vma21Q78T54 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Vma21Q78T54 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.39□□□□□ -0.43
Vma21Q78T54 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Vma21Q78T54 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.38□□□□□ -0.43
Vma21Q78T54 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.38□□□□□ -0.43
Vma21Q78T54 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vma21Q78T54 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.38□□□□□ -0.43
Vma21Q78T54 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.38□□□□□ -0.43
Vma21Q78T54 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vma21Q78T54 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.38□□□□□ -0.43
Vma21Q78T54 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Vma21Q78T54 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vma21Q78T54 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms