Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.16□□□□□ -0.46
Trav2Q5R1I9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav2Q5R1I9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Gm14822-201ENSMUST00000122247 291 ntBASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Gm18246-201ENSMUST00000221023 728 ntBASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Gm10175-201ENSMUST00000086013 645 ntBASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav2Q5R1I9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav2Q5R1I9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms