Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lins1Q3U1D0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lins1Q3U1D0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lins1Q3U1D0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lins1Q3U1D0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lins1Q3U1D0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lins1Q3U1D0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Gm16198-201ENSMUST00000118766 670 ntBASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Gm7063-201ENSMUST00000186840 981 ntBASIC18.06■□□□□ 0.48
Lins1Q3U1D0 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lins1Q3U1D0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lins1Q3U1D0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lins1Q3U1D0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lins1Q3U1D0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lins1Q3U1D0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lins1Q3U1D0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lins1Q3U1D0 Rprl2-201ENSMUST00000157150 290 ntBASIC18.05■□□□□ 0.48
Lins1Q3U1D0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.05■□□□□ 0.48
Lins1Q3U1D0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lins1Q3U1D0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lins1Q3U1D0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lins1Q3U1D0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lins1Q3U1D0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Lins1Q3U1D0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lins1Q3U1D0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.05■□□□□ 0.48
Lins1Q3U1D0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.04■□□□□ 0.48
Lins1Q3U1D0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Gm10499-201ENSMUST00000174094 934 ntBASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Gm18889-201ENSMUST00000174284 929 ntBASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Gm43474-201ENSMUST00000196415 774 ntBASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.03■□□□□ 0.48
Lins1Q3U1D0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lins1Q3U1D0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms