Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fndc4Q3TR08 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.01□□□□□ -0.33
Fndc4Q3TR08 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fndc4Q3TR08 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fndc4Q3TR08 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fndc4Q3TR08 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fndc4Q3TR08 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fndc4Q3TR08 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Fndc4Q3TR08 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Fndc4Q3TR08 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 Gm43399-201ENSMUST00000202546 2374 ntBASIC13□□□□□ -0.33
Fndc4Q3TR08 Gm45504-201ENSMUST00000211407 2107 ntBASIC13□□□□□ -0.33
Fndc4Q3TR08 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Fndc4Q3TR08 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 AC114585.2-202ENSMUST00000228094 426 ntBASIC13□□□□□ -0.33
Fndc4Q3TR08 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13□□□□□ -0.33
Fndc4Q3TR08 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13□□□□□ -0.33
Fndc4Q3TR08 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13□□□□□ -0.33
Fndc4Q3TR08 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Mir6404-201ENSMUST00000183699 94 ntBASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Fndc4Q3TR08 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Olfr129-201ENSMUST00000122318 993 ntBASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Fndc4Q3TR08 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms