Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sssca1P56873 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sssca1P56873 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Sssca1P56873 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.31□□□□□ -0.44
Sssca1P56873 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sssca1P56873 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sssca1P56873 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.31□□□□□ -0.44
Sssca1P56873 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.31□□□□□ -0.44
Sssca1P56873 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sssca1P56873 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Sssca1P56873 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.31□□□□□ -0.44
Sssca1P56873 Gm5587-201ENSMUST00000206270 674 ntBASIC12.31□□□□□ -0.44
Sssca1P56873 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sssca1P56873 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.31□□□□□ -0.44
Sssca1P56873 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.31□□□□□ -0.44
Sssca1P56873 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sssca1P56873 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Sssca1P56873 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sssca1P56873 Gm45328-201ENSMUST00000210942 917 ntBASIC12.3□□□□□ -0.44
Sssca1P56873 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.3□□□□□ -0.44
Sssca1P56873 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Sssca1P56873 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.3□□□□□ -0.44
Sssca1P56873 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sssca1P56873 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Sssca1P56873 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Sssca1P56873 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sssca1P56873 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sssca1P56873 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sssca1P56873 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Sssca1P56873 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sssca1P56873 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Sssca1P56873 Efs-202ENSMUST00000227037 2540 ntBASIC12.29□□□□□ -0.44
Sssca1P56873 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sssca1P56873 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sssca1P56873 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sssca1P56873 Gm14722-201ENSMUST00000118943 689 ntBASIC12.29□□□□□ -0.44
Sssca1P56873 Gm13312-201ENSMUST00000119631 718 ntBASIC12.29□□□□□ -0.44
Sssca1P56873 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms