Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC9.92□□□□□ -0.82
Xcl1P47993 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Gm26513-201ENSMUST00000181802 2489 ntBASIC9.92□□□□□ -0.82
Xcl1P47993 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Xcl1P47993 Acot6-202ENSMUST00000222921 3622 ntBASIC9.92□□□□□ -0.82
Xcl1P47993 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC9.91□□□□□ -0.82
Xcl1P47993 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Xcl1P47993 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Xcl1P47993 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
Xcl1P47993 Gm12500-202ENSMUST00000186471 2428 ntBASIC9.91□□□□□ -0.82
Xcl1P47993 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Xcl1P47993 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
Xcl1P47993 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
Xcl1P47993 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Flg-201ENSMUST00000050758 1488 ntBASIC9.91□□□□□ -0.82
Xcl1P47993 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Xcl1P47993 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC9.9□□□□□ -0.82
Xcl1P47993 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC9.9□□□□□ -0.82
Xcl1P47993 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
Xcl1P47993 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Gm43364-201ENSMUST00000196046 3274 ntBASIC9.9□□□□□ -0.82
Xcl1P47993 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Gm15820-201ENSMUST00000201566 728 ntBASIC9.9□□□□□ -0.82
Xcl1P47993 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC9.9□□□□□ -0.82
Xcl1P47993 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Xcl1P47993 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Gm42829-201ENSMUST00000198417 2585 ntBASIC9.9□□□□□ -0.82
Xcl1P47993 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Xcl1P47993 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Xcl1P47993 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Xcl1P47993 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Xcl1P47993 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Xcl1P47993 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Xcl1P47993 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Xcl1P47993 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Xcl1P47993 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Xcl1P47993 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Xcl1P47993 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
Xcl1P47993 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Xcl1P47993 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Xcl1P47993 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Xcl1P47993 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Xcl1P47993 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Xcl1P47993 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Xcl1P47993 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Xcl1P47993 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms