Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.34□□□□□ -0.27
Upk2P38575 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Upk2P38575 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.34□□□□□ -0.27
Upk2P38575 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Upk2P38575 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Upk2P38575 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Upk2P38575 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Upk2P38575 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Upk2P38575 Gm15173-201ENSMUST00000122049 433 ntBASIC13.34□□□□□ -0.27
Upk2P38575 Gm11452-201ENSMUST00000122376 690 ntBASIC13.34□□□□□ -0.27
Upk2P38575 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.34□□□□□ -0.27
Upk2P38575 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.34□□□□□ -0.27
Upk2P38575 Mir8098-201ENSMUST00000184011 137 ntBASIC13.34□□□□□ -0.27
Upk2P38575 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Gm6550-201ENSMUST00000187574 993 ntBASIC13.34□□□□□ -0.27
Upk2P38575 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.34□□□□□ -0.27
Upk2P38575 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Upk2P38575 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.34□□□□□ -0.27
Upk2P38575 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Upk2P38575 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Upk2P38575 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Upk2P38575 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Upk2P38575 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Upk2P38575 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.33□□□□□ -0.27
Upk2P38575 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Upk2P38575 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.33□□□□□ -0.28
Upk2P38575 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.33□□□□□ -0.28
Upk2P38575 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.33□□□□□ -0.28
Upk2P38575 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.33□□□□□ -0.28
Upk2P38575 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.33□□□□□ -0.28
Upk2P38575 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Upk2P38575 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.28
Upk2P38575 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Upk2P38575 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Upk2P38575 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Upk2P38575 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Upk2P38575 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.32□□□□□ -0.28
Upk2P38575 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Upk2P38575 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.32□□□□□ -0.28
Upk2P38575 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.32□□□□□ -0.28
Upk2P38575 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Gm5864-201ENSMUST00000202263 970 ntBASIC13.32□□□□□ -0.28
Upk2P38575 Gm10060-201ENSMUST00000212002 111 ntBASIC13.32□□□□□ -0.28
Upk2P38575 Gm7787-201ENSMUST00000216858 688 ntBASIC13.32□□□□□ -0.28
Upk2P38575 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.32□□□□□ -0.28
Upk2P38575 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Upk2P38575 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Upk2P38575 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms