Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.63■□□□□ 0.25
Sox5P35710 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox5P35710 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.63■□□□□ 0.25
Sox5P35710 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox5P35710 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.63■□□□□ 0.25
Sox5P35710 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.63■□□□□ 0.25
Sox5P35710 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Sox5P35710 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox5P35710 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox5P35710 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox5P35710 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox5P35710 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox5P35710 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.63■□□□□ 0.25
Sox5P35710 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Sox5P35710 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox5P35710 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox5P35710 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Sox5P35710 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Gm8318-201ENSMUST00000182954 872 ntBASIC16.62■□□□□ 0.25
Sox5P35710 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.62■□□□□ 0.25
Sox5P35710 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.62■□□□□ 0.25
Sox5P35710 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.62■□□□□ 0.25
Sox5P35710 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.62■□□□□ 0.25
Sox5P35710 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sox5P35710 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Celf4-206ENSMUST00000224553 1729 ntBASIC16.62■□□□□ 0.25
Sox5P35710 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox5P35710 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Sox5P35710 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Sox5P35710 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
Sox5P35710 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox5P35710 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox5P35710 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox5P35710 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox5P35710 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox5P35710 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox5P35710 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox5P35710 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox5P35710 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox5P35710 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox5P35710 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox5P35710 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox5P35710 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.61■□□□□ 0.25
Sox5P35710 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.61■□□□□ 0.25
Sox5P35710 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Sox5P35710 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sox5P35710 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox5P35710 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox5P35710 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sox5P35710 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox5P35710 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sox5P35710 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Sox5P35710 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sox5P35710 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.6■□□□□ 0.25
Sox5P35710 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.6■□□□□ 0.25
Sox5P35710 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.6■□□□□ 0.25
Sox5P35710 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.6■□□□□ 0.25
Sox5P35710 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.6■□□□□ 0.25
Sox5P35710 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Sox5P35710 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.6■□□□□ 0.25
Sox5P35710 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sox5P35710 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox5P35710 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms