Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CopeO89079 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CopeO89079 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CopeO89079 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CopeO89079 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CopeO89079 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CopeO89079 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CopeO89079 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CopeO89079 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CopeO89079 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CopeO89079 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
CopeO89079 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CopeO89079 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
CopeO89079 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CopeO89079 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CopeO89079 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CopeO89079 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.71■□□□□ 0.11
CopeO89079 Gm12134-201ENSMUST00000122109 520 ntBASIC15.71■□□□□ 0.11
CopeO89079 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.71■□□□□ 0.11
CopeO89079 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.71■□□□□ 0.11
CopeO89079 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.71■□□□□ 0.11
CopeO89079 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.71■□□□□ 0.11
CopeO89079 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CopeO89079 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CopeO89079 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CopeO89079 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
CopeO89079 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CopeO89079 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CopeO89079 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopeO89079 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CopeO89079 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopeO89079 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopeO89079 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopeO89079 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CopeO89079 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopeO89079 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopeO89079 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopeO89079 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CopeO89079 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopeO89079 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopeO89079 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CopeO89079 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.7■□□□□ 0.1
CopeO89079 Gm25016-201ENSMUST00000158399 131 ntBASIC15.7■□□□□ 0.1
CopeO89079 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.7■□□□□ 0.1
CopeO89079 Gm44454-201ENSMUST00000198541 138 ntBASIC15.7■□□□□ 0.1
CopeO89079 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopeO89079 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopeO89079 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopeO89079 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CopeO89079 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.7■□□□□ 0.1
CopeO89079 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.69■□□□□ 0.1
CopeO89079 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CopeO89079 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CopeO89079 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CopeO89079 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Gm29518-201ENSMUST00000190858 372 ntBASIC15.69■□□□□ 0.1
CopeO89079 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.69■□□□□ 0.1
CopeO89079 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CopeO89079 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CopeO89079 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CopeO89079 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms