Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Syn1O88935 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Syn1O88935 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Syn1O88935 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Syn1O88935 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Gm12091-201ENSMUST00000146791 830 ntBASIC15.61■□□□□ 0.09
Syn1O88935 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Gm44344-201ENSMUST00000200287 129 ntBASIC15.61■□□□□ 0.09
Syn1O88935 Gm18049-201ENSMUST00000208909 581 ntBASIC15.61■□□□□ 0.09
Syn1O88935 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Syn1O88935 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Syn1O88935 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.61■□□□□ 0.09
Syn1O88935 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Syn1O88935 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.6■□□□□ 0.09
Syn1O88935 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Syn1O88935 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Syn1O88935 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.6■□□□□ 0.09
Syn1O88935 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.6■□□□□ 0.09
Syn1O88935 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.6■□□□□ 0.09
Syn1O88935 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 Gm9908-201ENSMUST00000211534 448 ntBASIC15.6■□□□□ 0.09
Syn1O88935 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Syn1O88935 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Syn1O88935 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Syn1O88935 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.59■□□□□ 0.09
Syn1O88935 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Syn1O88935 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Syn1O88935 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.59■□□□□ 0.09
Syn1O88935 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Syn1O88935 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.59■□□□□ 0.09
Syn1O88935 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.59■□□□□ 0.09
Syn1O88935 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.59■□□□□ 0.09
Syn1O88935 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.59■□□□□ 0.09
Syn1O88935 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Syn1O88935 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.59■□□□□ 0.09
Syn1O88935 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.59■□□□□ 0.09
Syn1O88935 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Syn1O88935 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Syn1O88935 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Syn1O88935 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Syn1O88935 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms