Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pde6dO55057 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Pde6dO55057 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pde6dO55057 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.03□□□□□ -0.48
Pde6dO55057 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Pde6dO55057 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pde6dO55057 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pde6dO55057 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pde6dO55057 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pde6dO55057 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pde6dO55057 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pde6dO55057 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pde6dO55057 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pde6dO55057 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Pde6dO55057 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.02□□□□□ -0.49
Pde6dO55057 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pde6dO55057 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pde6dO55057 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pde6dO55057 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.02□□□□□ -0.49
Pde6dO55057 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.02□□□□□ -0.49
Pde6dO55057 Mir6404-201ENSMUST00000183699 94 ntBASIC12.02□□□□□ -0.49
Pde6dO55057 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.02□□□□□ -0.49
Pde6dO55057 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.02□□□□□ -0.49
Pde6dO55057 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.02□□□□□ -0.49
Pde6dO55057 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pde6dO55057 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pde6dO55057 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pde6dO55057 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pde6dO55057 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pde6dO55057 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pde6dO55057 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pde6dO55057 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pde6dO55057 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pde6dO55057 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pde6dO55057 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pde6dO55057 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
Pde6dO55057 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pde6dO55057 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.01□□□□□ -0.49
Pde6dO55057 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.01□□□□□ -0.49
Pde6dO55057 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.01□□□□□ -0.49
Pde6dO55057 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.01□□□□□ -0.49
Pde6dO55057 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.01□□□□□ -0.49
Pde6dO55057 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pde6dO55057 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.01□□□□□ -0.49
Pde6dO55057 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.01□□□□□ -0.49
Pde6dO55057 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.01□□□□□ -0.49
Pde6dO55057 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pde6dO55057 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pde6dO55057 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12□□□□□ -0.49
Pde6dO55057 Gm23547-201ENSMUST00000158210 271 ntBASIC12□□□□□ -0.49
Pde6dO55057 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12□□□□□ -0.49
Pde6dO55057 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pde6dO55057 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pde6dO55057 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms