Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdmt1O55055 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdmt1O55055 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdmt1O55055 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdmt1O55055 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdmt1O55055 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdmt1O55055 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.69■□□□□ 0.26
Trdmt1O55055 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdmt1O55055 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.69■□□□□ 0.26
Trdmt1O55055 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdmt1O55055 Gm18766-201ENSMUST00000189811 808 ntBASIC16.69■□□□□ 0.26
Trdmt1O55055 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdmt1O55055 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.69■□□□□ 0.26
Trdmt1O55055 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trdmt1O55055 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdmt1O55055 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdmt1O55055 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.69■□□□□ 0.26
Trdmt1O55055 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdmt1O55055 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdmt1O55055 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdmt1O55055 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdmt1O55055 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trdmt1O55055 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.69■□□□□ 0.26
Trdmt1O55055 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trdmt1O55055 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Trdmt1O55055 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trdmt1O55055 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Trdmt1O55055 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trdmt1O55055 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.68■□□□□ 0.26
Trdmt1O55055 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trdmt1O55055 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.68■□□□□ 0.26
Trdmt1O55055 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.68■□□□□ 0.26
Trdmt1O55055 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.68■□□□□ 0.26
Trdmt1O55055 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trdmt1O55055 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trdmt1O55055 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
Trdmt1O55055 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trdmt1O55055 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trdmt1O55055 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.67■□□□□ 0.26
Trdmt1O55055 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.67■□□□□ 0.26
Trdmt1O55055 Mir7684-201ENSMUST00000183858 60 ntBASIC16.67■□□□□ 0.26
Trdmt1O55055 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.67■□□□□ 0.26
Trdmt1O55055 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trdmt1O55055 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trdmt1O55055 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trdmt1O55055 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trdmt1O55055 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trdmt1O55055 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trdmt1O55055 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.66■□□□□ 0.26
Trdmt1O55055 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trdmt1O55055 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trdmt1O55055 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trdmt1O55055 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trdmt1O55055 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Trdmt1O55055 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trdmt1O55055 Gm5745-201ENSMUST00000183748 313 ntBASIC16.66■□□□□ 0.26
Trdmt1O55055 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.66■□□□□ 0.26
Trdmt1O55055 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.66■□□□□ 0.26
Trdmt1O55055 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trdmt1O55055 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.66■□□□□ 0.26
Trdmt1O55055 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trdmt1O55055 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trdmt1O55055 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trdmt1O55055 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trdmt1O55055 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trdmt1O55055 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms