Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.35■□□□□ 0.21
Nr1i3O35627 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Nr1i3O35627 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.35■□□□□ 0.21
Nr1i3O35627 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.35■□□□□ 0.21
Nr1i3O35627 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.35■□□□□ 0.21
Nr1i3O35627 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.35■□□□□ 0.21
Nr1i3O35627 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.35■□□□□ 0.21
Nr1i3O35627 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.35■□□□□ 0.21
Nr1i3O35627 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Nr1i3O35627 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.35■□□□□ 0.21
Nr1i3O35627 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nr1i3O35627 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.34■□□□□ 0.21
Nr1i3O35627 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1i3O35627 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1i3O35627 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1i3O35627 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1i3O35627 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1i3O35627 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1i3O35627 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1i3O35627 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Nr1i3O35627 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.34■□□□□ 0.21
Nr1i3O35627 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1i3O35627 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1i3O35627 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.34■□□□□ 0.21
Nr1i3O35627 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1i3O35627 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nr1i3O35627 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
Nr1i3O35627 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1i3O35627 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1i3O35627 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1i3O35627 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.34■□□□□ 0.21
Nr1i3O35627 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1i3O35627 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.34■□□□□ 0.21
Nr1i3O35627 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1i3O35627 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nr1i3O35627 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Nr1i3O35627 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nr1i3O35627 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1i3O35627 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.33■□□□□ 0.2
Nr1i3O35627 Gm12134-201ENSMUST00000122109 520 ntBASIC16.33■□□□□ 0.2
Nr1i3O35627 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1i3O35627 Gm18489-201ENSMUST00000172565 551 ntBASIC16.33■□□□□ 0.2
Nr1i3O35627 Gm10499-201ENSMUST00000174094 934 ntBASIC16.33■□□□□ 0.2
Nr1i3O35627 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1i3O35627 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.33■□□□□ 0.2
Nr1i3O35627 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1i3O35627 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Nr1i3O35627 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.33■□□□□ 0.2
Nr1i3O35627 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1i3O35627 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1i3O35627 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1i3O35627 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1i3O35627 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1i3O35627 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1i3O35627 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1i3O35627 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1i3O35627 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.33■□□□□ 0.2
Nr1i3O35627 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Nr1i3O35627 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.33■□□□□ 0.2
Nr1i3O35627 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1i3O35627 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nr1i3O35627 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.32■□□□□ 0.2
Nr1i3O35627 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Nr1i3O35627 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.32■□□□□ 0.2
Nr1i3O35627 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.32■□□□□ 0.2
Nr1i3O35627 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.32■□□□□ 0.2
Nr1i3O35627 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nr1i3O35627 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.32■□□□□ 0.2
Nr1i3O35627 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.32■□□□□ 0.2
Nr1i3O35627 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.32■□□□□ 0.2
Nr1i3O35627 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nr1i3O35627 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nr1i3O35627 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nr1i3O35627 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1i3O35627 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.31■□□□□ 0.2
Nr1i3O35627 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms