Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hps1O08983 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.15□□□□□ -0.14
Hps1O08983 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hps1O08983 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hps1O08983 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.15□□□□□ -0.14
Hps1O08983 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hps1O08983 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Hps1O08983 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hps1O08983 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hps1O08983 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hps1O08983 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hps1O08983 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.15□□□□□ -0.14
Hps1O08983 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hps1O08983 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.15□□□□□ -0.14
Hps1O08983 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hps1O08983 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hps1O08983 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hps1O08983 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hps1O08983 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hps1O08983 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.14□□□□□ -0.15
Hps1O08983 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Hps1O08983 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.14□□□□□ -0.15
Hps1O08983 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.14□□□□□ -0.15
Hps1O08983 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.14□□□□□ -0.15
Hps1O08983 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.14□□□□□ -0.15
Hps1O08983 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Hps1O08983 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Hps1O08983 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Hps1O08983 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.14□□□□□ -0.15
Hps1O08983 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hps1O08983 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Hps1O08983 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.14□□□□□ -0.15
Hps1O08983 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hps1O08983 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.13□□□□□ -0.15
Hps1O08983 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.13□□□□□ -0.15
Hps1O08983 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Hps1O08983 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hps1O08983 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.12□□□□□ -0.15
Hps1O08983 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Hps1O08983 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hps1O08983 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hps1O08983 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hps1O08983 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hps1O08983 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hps1O08983 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hps1O08983 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hps1O08983 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Hps1O08983 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.12□□□□□ -0.15
Hps1O08983 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hps1O08983 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hps1O08983 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hps1O08983 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hps1O08983 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms