Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TprF6ZDS4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TprF6ZDS4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Mir8102-201ENSMUST00000184148 139 ntBASIC13.97□□□□□ -0.17
TprF6ZDS4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TprF6ZDS4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.97□□□□□ -0.17
TprF6ZDS4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TprF6ZDS4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TprF6ZDS4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
TprF6ZDS4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TprF6ZDS4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
TprF6ZDS4 Gm6973-201ENSMUST00000117080 721 ntBASIC13.96□□□□□ -0.17
TprF6ZDS4 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.96□□□□□ -0.17
TprF6ZDS4 Gm27618-201ENSMUST00000183671 60 ntBASIC13.96□□□□□ -0.17
TprF6ZDS4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TprF6ZDS4 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.96□□□□□ -0.17
TprF6ZDS4 Gm2272-201ENSMUST00000194903 582 ntBASIC13.96□□□□□ -0.17
TprF6ZDS4 Gm45331-201ENSMUST00000209868 554 ntBASIC13.96□□□□□ -0.17
TprF6ZDS4 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TprF6ZDS4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TprF6ZDS4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
TprF6ZDS4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TprF6ZDS4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TprF6ZDS4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TprF6ZDS4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TprF6ZDS4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TprF6ZDS4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TprF6ZDS4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TprF6ZDS4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TprF6ZDS4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TprF6ZDS4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TprF6ZDS4 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TprF6ZDS4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.96□□□□□ -0.17
TprF6ZDS4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.96□□□□□ -0.17
TprF6ZDS4 Gm29541-201ENSMUST00000191351 678 ntBASIC13.96□□□□□ -0.17
TprF6ZDS4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TprF6ZDS4 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.96□□□□□ -0.17
TprF6ZDS4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.96□□□□□ -0.17
TprF6ZDS4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
TprF6ZDS4 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.96□□□□□ -0.18
TprF6ZDS4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TprF6ZDS4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TprF6ZDS4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.18
TprF6ZDS4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.96□□□□□ -0.18
TprF6ZDS4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TprF6ZDS4 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TprF6ZDS4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TprF6ZDS4 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.95□□□□□ -0.18
TprF6ZDS4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.95□□□□□ -0.18
TprF6ZDS4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TprF6ZDS4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.95□□□□□ -0.18
TprF6ZDS4 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.95□□□□□ -0.18
TprF6ZDS4 Gm10154-201ENSMUST00000084445 354 ntBASIC13.95□□□□□ -0.18
TprF6ZDS4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TprF6ZDS4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TprF6ZDS4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
TprF6ZDS4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TprF6ZDS4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TprF6ZDS4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TprF6ZDS4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TprF6ZDS4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TprF6ZDS4 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.95□□□□□ -0.18
TprF6ZDS4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TprF6ZDS4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TprF6ZDS4 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.95□□□□□ -0.18
TprF6ZDS4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TprF6ZDS4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TprF6ZDS4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TprF6ZDS4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TprF6ZDS4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TprF6ZDS4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TprF6ZDS4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TprF6ZDS4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TprF6ZDS4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TprF6ZDS4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TprF6ZDS4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.94□□□□□ -0.18
TprF6ZDS4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TprF6ZDS4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TprF6ZDS4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TprF6ZDS4 Gm9257-201ENSMUST00000221254 232 ntBASIC13.94□□□□□ -0.18
TprF6ZDS4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.94□□□□□ -0.18
TprF6ZDS4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.94□□□□□ -0.18
TprF6ZDS4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TprF6ZDS4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TprF6ZDS4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TprF6ZDS4 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms