Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gm45760-201ENSMUST00000212190 1782 ntBASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gm16061-201ENSMUST00000122167 857 ntBASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gm7370-201ENSMUST00000219471 767 ntBASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gm13034-201ENSMUST00000121342 3177 ntBASIC10.45□□□□□ -0.74
Trav9d-4A0A0G2JG37 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gm7213-201ENSMUST00000215977 950 ntBASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Gm11960-202ENSMUST00000181063 2858 ntBASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav9d-4A0A0G2JG37 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9d-4A0A0G2JG37 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav9d-4A0A0G2JG37 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav9d-4A0A0G2JG37 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9d-4A0A0G2JG37 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9d-4A0A0G2JG37 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9d-4A0A0G2JG37 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9d-4A0A0G2JG37 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9d-4A0A0G2JG37 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav9d-4A0A0G2JG37 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9d-4A0A0G2JG37 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9d-4A0A0G2JG37 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav9d-4A0A0G2JG37 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav9d-4A0A0G2JG37 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms