Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm9013-201ENSMUST00000132939 882 ntBASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms