Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm18959-201ENSMUST00000208954 655 ntBASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm19164-201ENSMUST00000210667 640 ntBASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Celf4-206ENSMUST00000224553 1729 ntBASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav6d-5A0A075B6B9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-5A0A075B6B9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-5A0A075B6B9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-5A0A075B6B9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-5A0A075B6B9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav6d-5A0A075B6B9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-5A0A075B6B9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav6d-5A0A075B6B9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav6d-5A0A075B6B9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-5A0A075B6B9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav6d-5A0A075B6B9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-5A0A075B6B9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-5A0A075B6B9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav6d-5A0A075B6B9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm18101-201ENSMUST00000215769 548 ntBASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms