Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav3-4A0A075B654 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Gm18958-201ENSMUST00000174258 762 ntBASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Gm10517-202ENSMUST00000192970 758 ntBASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Gm38197-201ENSMUST00000192320 2122 ntBASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Gfra2-202ENSMUST00000227633 1480 ntBASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav3-4A0A075B654 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Trav3-4A0A075B654 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3-4A0A075B654 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3-4A0A075B654 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3-4A0A075B654 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3-4A0A075B654 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3-4A0A075B654 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3-4A0A075B654 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3-4A0A075B654 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Gm9731-201ENSMUST00000209480 747 ntBASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Rab3c-203ENSMUST00000224180 967 ntBASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Gm10493-201ENSMUST00000097270 612 ntBASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-4A0A075B654 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Carlr-201ENSMUST00000181515 2574 ntBASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav3-4A0A075B654 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms