Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Acot6-202ENSMUST00000222921 3622 ntBASIC10.96□□□□□ -0.66
Trav8-1A0A075B641 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav8-1A0A075B641 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav8-1A0A075B641 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav8-1A0A075B641 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav8-1A0A075B641 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav8-1A0A075B641 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav8-1A0A075B641 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav8-1A0A075B641 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav8-1A0A075B641 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav8-1A0A075B641 Gm5357-201ENSMUST00000212720 1924 ntBASIC10.96□□□□□ -0.66
Trav8-1A0A075B641 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav8-1A0A075B641 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav8-1A0A075B641 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav8-1A0A075B641 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Gm6190-201ENSMUST00000220683 1374 ntBASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav8-1A0A075B641 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav8-1A0A075B641 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms