Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClcnkaQ9WUB7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
ClcnkaQ9WUB7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClcnkaQ9WUB7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClcnkaQ9WUB7 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.06□□□□□ -0.16
ClcnkaQ9WUB7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClcnkaQ9WUB7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClcnkaQ9WUB7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClcnkaQ9WUB7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ClcnkaQ9WUB7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ClcnkaQ9WUB7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Grk6-207ENSMUST00000225925 2769 ntBASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Gm15358-201ENSMUST00000119249 520 ntBASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Gm11452-201ENSMUST00000122376 690 ntBASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Gm27646-201ENSMUST00000183989 110 ntBASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Mir8098-201ENSMUST00000184011 137 ntBASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ClcnkaQ9WUB7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Gm25990-201ENSMUST00000102440 86 ntBASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Gm5864-201ENSMUST00000202263 970 ntBASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ClcnkaQ9WUB7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms