Protein–RNA interactions for Protein: Q9JMB8

Cntn6, Contactin-6, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn6Q9JMB8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cntn6Q9JMB8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cntn6Q9JMB8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cntn6Q9JMB8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cntn6Q9JMB8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cntn6Q9JMB8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cntn6Q9JMB8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Gm44335-201ENSMUST00000196879 141 ntBASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Gm44297-201ENSMUST00000198304 141 ntBASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Gm44346-201ENSMUST00000198851 141 ntBASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cntn6Q9JMB8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cntn6Q9JMB8 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Cntn6Q9JMB8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cntn6Q9JMB8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Cntn6Q9JMB8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cntn6Q9JMB8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cntn6Q9JMB8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cntn6Q9JMB8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cntn6Q9JMB8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cntn6Q9JMB8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cntn6Q9JMB8 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cntn6Q9JMB8 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cntn6Q9JMB8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Cntn6Q9JMB8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cntn6Q9JMB8 Gm25287-201ENSMUST00000103846 110 ntBASIC16.49■□□□□ 0.23
Cntn6Q9JMB8 Gm22918-201ENSMUST00000103855 110 ntBASIC16.49■□□□□ 0.23
Cntn6Q9JMB8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms