Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ush1cQ9ES64 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ush1cQ9ES64 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Ush1cQ9ES64 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Ush1cQ9ES64 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ush1cQ9ES64 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Ush1cQ9ES64 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ush1cQ9ES64 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ush1cQ9ES64 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ush1cQ9ES64 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ush1cQ9ES64 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC17.51■□□□□ 0.39
Ush1cQ9ES64 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Gm2274-201ENSMUST00000184539 609 ntBASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ush1cQ9ES64 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ush1cQ9ES64 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Gm45058-201ENSMUST00000205810 766 ntBASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ush1cQ9ES64 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms