Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Gm13015-201ENSMUST00000118674 204 ntBASIC18.9■□□□□ 0.62
Nip7Q9CXK8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Gm27989-201ENSMUST00000184721 107 ntBASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nip7Q9CXK8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Gm13453-201ENSMUST00000118708 357 ntBASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Gm23547-201ENSMUST00000158210 271 ntBASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Gm5866-201ENSMUST00000177881 973 ntBASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Gm27920-201ENSMUST00000183953 96 ntBASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Gm6888-201ENSMUST00000221983 706 ntBASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nip7Q9CXK8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Gm18049-201ENSMUST00000208909 581 ntBASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nip7Q9CXK8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Gm5745-201ENSMUST00000183748 313 ntBASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Mir8102-201ENSMUST00000184148 139 ntBASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nip7Q9CXK8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nip7Q9CXK8 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.86■□□□□ 0.61
Nip7Q9CXK8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.86■□□□□ 0.61
Nip7Q9CXK8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nip7Q9CXK8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nip7Q9CXK8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nip7Q9CXK8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.86■□□□□ 0.61
Nip7Q9CXK8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nip7Q9CXK8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms