Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ddx47Q9CWX9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Ddx47Q9CWX9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.71■□□□□ 0.1
Ddx47Q9CWX9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ddx47Q9CWX9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ddx47Q9CWX9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ddx47Q9CWX9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Ddx47Q9CWX9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Gm5417-201ENSMUST00000079706 384 ntBASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx47Q9CWX9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms