Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Use1Q9CQ56 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.43□□□□□ -0.1
Use1Q9CQ56 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.43□□□□□ -0.1
Use1Q9CQ56 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Use1Q9CQ56 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.43□□□□□ -0.1
Use1Q9CQ56 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.43□□□□□ -0.1
Use1Q9CQ56 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Use1Q9CQ56 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Gm15165-201ENSMUST00000118140 502 ntBASIC14.42□□□□□ -0.1
Use1Q9CQ56 Olfr129-201ENSMUST00000122318 993 ntBASIC14.42□□□□□ -0.1
Use1Q9CQ56 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Use1Q9CQ56 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.41□□□□□ -0.1
Use1Q9CQ56 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.41□□□□□ -0.1
Use1Q9CQ56 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.41□□□□□ -0.1
Use1Q9CQ56 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.41□□□□□ -0.1
Use1Q9CQ56 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Use1Q9CQ56 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Use1Q9CQ56 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Use1Q9CQ56 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Use1Q9CQ56 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Use1Q9CQ56 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Use1Q9CQ56 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Use1Q9CQ56 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Use1Q9CQ56 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.4□□□□□ -0.1
Use1Q9CQ56 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Use1Q9CQ56 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.4□□□□□ -0.1
Use1Q9CQ56 Gm8344-201ENSMUST00000119813 856 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms