Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Gm45058-201ENSMUST00000205810 766 ntBASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Gm9987-201ENSMUST00000069768 567 ntBASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Krt88Q9CPR6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Krt88Q9CPR6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Krt88Q9CPR6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Krt88Q9CPR6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Krt88Q9CPR6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Krt88Q9CPR6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Krt88Q9CPR6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Gm11355-201ENSMUST00000121120 306 ntBASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Gm13836-201ENSMUST00000121159 501 ntBASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Krt88Q9CPR6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Gm18959-201ENSMUST00000208954 655 ntBASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Gm21559-201ENSMUST00000220638 855 ntBASIC13.76□□□□□ -0.21
Krt88Q9CPR6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Gm8587-201ENSMUST00000076538 843 ntBASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Krt88Q9CPR6 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms