Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkd1Q99MH6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Gm27742-201ENSMUST00000184667 60 ntBASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Nkd1Q99MH6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Nkd1Q99MH6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Grk6-207ENSMUST00000225925 2769 ntBASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd1Q99MH6 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Gm13836-201ENSMUST00000121159 501 ntBASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Olfr129-201ENSMUST00000122318 993 ntBASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd1Q99MH6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.37□□□□□ -0.11
Nkd1Q99MH6 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.37□□□□□ -0.11
Nkd1Q99MH6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms