Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nkx6-1Q99MA9 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.27□□□□□ -0.13
Nkx6-1Q99MA9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.27□□□□□ -0.13
Nkx6-1Q99MA9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-1Q99MA9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-1Q99MA9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-1Q99MA9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.27□□□□□ -0.13
Nkx6-1Q99MA9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-1Q99MA9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-1Q99MA9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Nkx6-1Q99MA9 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Syt7-205ENSMUST00000224135 1557 ntBASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Gm18737-201ENSMUST00000173594 937 ntBASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-1Q99MA9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Gm7488-201ENSMUST00000117148 684 ntBASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Gm16215-201ENSMUST00000161990 637 ntBASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-1Q99MA9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Gm44855-201ENSMUST00000205725 362 ntBASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Nkx6-1Q99MA9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms