Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.36□□□□□ -0.27
Scrt1Q99M85 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.36□□□□□ -0.27
Scrt1Q99M85 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Scrt1Q99M85 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.35□□□□□ -0.27
Scrt1Q99M85 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.35□□□□□ -0.27
Scrt1Q99M85 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Mir7023-201ENSMUST00000185093 64 ntBASIC13.35□□□□□ -0.27
Scrt1Q99M85 Gm9682-201ENSMUST00000197505 556 ntBASIC13.35□□□□□ -0.27
Scrt1Q99M85 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Gm7787-201ENSMUST00000216858 688 ntBASIC13.35□□□□□ -0.27
Scrt1Q99M85 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scrt1Q99M85 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Gm15427-201ENSMUST00000117288 531 ntBASIC13.34□□□□□ -0.27
Scrt1Q99M85 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.34□□□□□ -0.27
Scrt1Q99M85 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Gm5177-201ENSMUST00000183092 997 ntBASIC13.34□□□□□ -0.27
Scrt1Q99M85 Gm43474-201ENSMUST00000196415 774 ntBASIC13.34□□□□□ -0.27
Scrt1Q99M85 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.34□□□□□ -0.27
Scrt1Q99M85 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scrt1Q99M85 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scrt1Q99M85 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.33□□□□□ -0.27
Scrt1Q99M85 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.33□□□□□ -0.27
Scrt1Q99M85 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scrt1Q99M85 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scrt1Q99M85 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms