Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lysmd3Q99LE3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Gm27702-201ENSMUST00000184512 56 ntBASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Lysmd3Q99LE3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Gm14822-201ENSMUST00000122247 291 ntBASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Gm44492-201ENSMUST00000197012 141 ntBASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lysmd3Q99LE3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Gm24513-201ENSMUST00000174964 138 ntBASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Gm5177-201ENSMUST00000183092 997 ntBASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lysmd3Q99LE3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Lysmd3Q99LE3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Lysmd3Q99LE3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lysmd3Q99LE3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lysmd3Q99LE3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lysmd3Q99LE3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms