Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.18■□□□□ 0.18
TraipQ8VIG6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.18■□□□□ 0.18
TraipQ8VIG6 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.18■□□□□ 0.18
TraipQ8VIG6 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.18■□□□□ 0.18
TraipQ8VIG6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TraipQ8VIG6 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Gm6973-201ENSMUST00000117080 721 ntBASIC16.17■□□□□ 0.18
TraipQ8VIG6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.17■□□□□ 0.18
TraipQ8VIG6 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Gm43125-201ENSMUST00000201724 730 ntBASIC16.17■□□□□ 0.18
TraipQ8VIG6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.17■□□□□ 0.18
TraipQ8VIG6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.17■□□□□ 0.18
TraipQ8VIG6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.17■□□□□ 0.18
TraipQ8VIG6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
TraipQ8VIG6 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TraipQ8VIG6 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.16■□□□□ 0.18
TraipQ8VIG6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.16■□□□□ 0.18
TraipQ8VIG6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TraipQ8VIG6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TraipQ8VIG6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms