Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc9Q8VC31 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc9Q8VC31 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc9Q8VC31 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Ccdc9Q8VC31 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc9Q8VC31 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Gm10653-202ENSMUST00000139570 835 ntBASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc9Q8VC31 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Gm15378-201ENSMUST00000121894 207 ntBASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc9Q8VC31 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Ksr1-207ENSMUST00000226282 5260 ntBASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ccdc9Q8VC31 Matn2-206ENSMUST00000228570 2798 ntBASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Gm8520-201ENSMUST00000186517 868 ntBASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc9Q8VC31 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc9Q8VC31 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc9Q8VC31 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc9Q8VC31 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc9Q8VC31 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc9Q8VC31 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc9Q8VC31 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC18.35■□□□□ 0.53
Ccdc9Q8VC31 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc9Q8VC31 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.35■□□□□ 0.53
Ccdc9Q8VC31 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc9Q8VC31 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc9Q8VC31 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc9Q8VC31 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms