Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc58Q8R3Q6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc58Q8R3Q6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc58Q8R3Q6 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc58Q8R3Q6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc58Q8R3Q6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc58Q8R3Q6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccdc58Q8R3Q6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc58Q8R3Q6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc58Q8R3Q6 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc58Q8R3Q6 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc58Q8R3Q6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Gm27011-201ENSMUST00000182352 972 ntBASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Gm37722-201ENSMUST00000193757 208 ntBASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc58Q8R3Q6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc58Q8R3Q6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc58Q8R3Q6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc58Q8R3Q6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc58Q8R3Q6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc58Q8R3Q6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.71□□□□□ -0.22
Ccdc58Q8R3Q6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc58Q8R3Q6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Gm13559-201ENSMUST00000120476 863 ntBASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc58Q8R3Q6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Gm12134-201ENSMUST00000122109 520 ntBASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc58Q8R3Q6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms