Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Gm28659-201ENSMUST00000188013 759 ntBASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Gm10060-201ENSMUST00000212002 111 ntBASIC17.99■□□□□ 0.47
Atf7Q8R0S1 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Atf7Q8R0S1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf7Q8R0S1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.97■□□□□ 0.47
Atf7Q8R0S1 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 AV026068-213ENSMUST00000223675 1171 ntBASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.96■□□□□ 0.47
Atf7Q8R0S1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms