Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alms1Q8K4E0 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.85□□□□□ -0.03
Alms1Q8K4E0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Alms1Q8K4E0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alms1Q8K4E0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alms1Q8K4E0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alms1Q8K4E0 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.85□□□□□ -0.03
Alms1Q8K4E0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.85□□□□□ -0.03
Alms1Q8K4E0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alms1Q8K4E0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alms1Q8K4E0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.85□□□□□ -0.03
Alms1Q8K4E0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Alms1Q8K4E0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alms1Q8K4E0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Gm13015-201ENSMUST00000118674 204 ntBASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Gm18057-201ENSMUST00000208220 503 ntBASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.84□□□□□ -0.03
Alms1Q8K4E0 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.84□□□□□ -0.03
Alms1Q8K4E0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Alms1Q8K4E0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Alms1Q8K4E0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Alms1Q8K4E0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Alms1Q8K4E0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Alms1Q8K4E0 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.83□□□□□ -0.03
Alms1Q8K4E0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.83□□□□□ -0.03
Alms1Q8K4E0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.83□□□□□ -0.03
Alms1Q8K4E0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Alms1Q8K4E0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.83□□□□□ -0.04
Alms1Q8K4E0 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Alms1Q8K4E0 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Gm14719-201ENSMUST00000121891 340 ntBASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Gm24158-201ENSMUST00000175263 71 ntBASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Alms1Q8K4E0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms