Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shtn1Q8K2Q9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Gm2810-201ENSMUST00000118681 990 ntBASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Gm15483-201ENSMUST00000120338 456 ntBASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shtn1Q8K2Q9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Gm13015-201ENSMUST00000118674 204 ntBASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shtn1Q8K2Q9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Gm14127-201ENSMUST00000117906 678 ntBASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Gm13453-201ENSMUST00000118708 357 ntBASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Gm15487-201ENSMUST00000122373 465 ntBASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Gm7653-201ENSMUST00000214567 508 ntBASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shtn1Q8K2Q9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Shtn1Q8K2Q9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Shtn1Q8K2Q9 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.89■□□□□ 0.45
Shtn1Q8K2Q9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms