Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lysmd4Q8CC84 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lysmd4Q8CC84 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Gm13312-201ENSMUST00000119631 718 ntBASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lysmd4Q8CC84 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lysmd4Q8CC84 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms