Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtp1Q8C8C1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
Rtp1Q8C8C1 Gm15321-201ENSMUST00000121290 288 ntBASIC17.33■□□□□ 0.36
Rtp1Q8C8C1 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rtp1Q8C8C1 Gm27680-201ENSMUST00000184192 160 ntBASIC17.33■□□□□ 0.36
Rtp1Q8C8C1 Gm44344-201ENSMUST00000200287 129 ntBASIC17.33■□□□□ 0.36
Rtp1Q8C8C1 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC17.33■□□□□ 0.36
Rtp1Q8C8C1 Gm6218-201ENSMUST00000219812 628 ntBASIC17.33■□□□□ 0.36
Rtp1Q8C8C1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.33■□□□□ 0.36
Rtp1Q8C8C1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtp1Q8C8C1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtp1Q8C8C1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtp1Q8C8C1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtp1Q8C8C1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtp1Q8C8C1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtp1Q8C8C1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Gm23984-201ENSMUST00000157139 203 ntBASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Gm18766-201ENSMUST00000189811 808 ntBASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtp1Q8C8C1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Gm15483-201ENSMUST00000120338 456 ntBASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Mir7085-201ENSMUST00000184353 66 ntBASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtp1Q8C8C1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Gm16026-204ENSMUST00000162652 683 ntBASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Gm45384-201ENSMUST00000210451 277 ntBASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rtp1Q8C8C1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.29■□□□□ 0.36
Rtp1Q8C8C1 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp1Q8C8C1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp1Q8C8C1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp1Q8C8C1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.29■□□□□ 0.36
Rtp1Q8C8C1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.29■□□□□ 0.36
Rtp1Q8C8C1 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtp1Q8C8C1 Gm11478-201ENSMUST00000117851 599 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms