Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Aph1bQ8C7N7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Aph1bQ8C7N7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Aph1bQ8C7N7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Aph1bQ8C7N7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Aph1bQ8C7N7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Aph1bQ8C7N7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.08■□□□□ 0.01
Aph1bQ8C7N7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Aph1bQ8C7N7 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.08■□□□□ 0
Aph1bQ8C7N7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.08■□□□□ 0
Aph1bQ8C7N7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Gm11780-201ENSMUST00000136880 516 ntBASIC15.08■□□□□ 0
Aph1bQ8C7N7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Aph1bQ8C7N7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.08■□□□□ 0
Aph1bQ8C7N7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.07■□□□□ 0
Aph1bQ8C7N7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.07■□□□□ 0
Aph1bQ8C7N7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Gm6296-201ENSMUST00000222599 943 ntBASIC15.07■□□□□ 0
Aph1bQ8C7N7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.07■□□□□ 0
Aph1bQ8C7N7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.07■□□□□ 0
Aph1bQ8C7N7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms