Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Gm14859-201ENSMUST00000117752 357 ntBASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cpsf7Q8BTV2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Gm23547-201ENSMUST00000158210 271 ntBASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cpsf7Q8BTV2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.27■□□□□ 0.03
Cpsf7Q8BTV2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.27■□□□□ 0.03
Cpsf7Q8BTV2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cpsf7Q8BTV2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf7Q8BTV2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf7Q8BTV2 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cpsf7Q8BTV2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Gm7284-201ENSMUST00000131667 944 ntBASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Gm29518-201ENSMUST00000190858 372 ntBASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cpsf7Q8BTV2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gm8825-201ENSMUST00000182565 998 ntBASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gm4518-201ENSMUST00000182638 718 ntBASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Gm17808-201ENSMUST00000200859 894 ntBASIC15.25■□□□□ 0.03
Cpsf7Q8BTV2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms