Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Npas4Q8BGD7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Npas4Q8BGD7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Npas4Q8BGD7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16■□□□□ 0.15
Npas4Q8BGD7 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Gm13015-201ENSMUST00000118674 204 ntBASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Gm27989-201ENSMUST00000184721 107 ntBASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Gm29541-201ENSMUST00000191351 678 ntBASIC15.99■□□□□ 0.15
Npas4Q8BGD7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Gm6888-201ENSMUST00000221983 706 ntBASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Npas4Q8BGD7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Mir7684-201ENSMUST00000183858 60 ntBASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Npas4Q8BGD7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.97■□□□□ 0.15
Npas4Q8BGD7 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Npas4Q8BGD7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 Gm5745-201ENSMUST00000183748 313 ntBASIC15.96■□□□□ 0.15
Npas4Q8BGD7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Npas4Q8BGD7 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms