Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.9□□□□□ -0.34
Upk3bQ80YF6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Upk3bQ80YF6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Upk3bQ80YF6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Upk3bQ80YF6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Gm11950-201ENSMUST00000121615 838 ntBASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Upk3bQ80YF6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Efs-202ENSMUST00000227037 2540 ntBASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk3bQ80YF6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms