Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc2Q6PDG5 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smarcc2Q6PDG5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarcc2Q6PDG5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarcc2Q6PDG5 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarcc2Q6PDG5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarcc2Q6PDG5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.77■□□□□ 0.43
Smarcc2Q6PDG5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarcc2Q6PDG5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarcc2Q6PDG5 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smarcc2Q6PDG5 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smarcc2Q6PDG5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Gm13036-201ENSMUST00000117799 748 ntBASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.75■□□□□ 0.43
Smarcc2Q6PDG5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Smarcc2Q6PDG5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Smarcc2Q6PDG5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms