Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm4Q6IRU2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Tpm4Q6IRU2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tpm4Q6IRU2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Gm7367-201ENSMUST00000057611 492 ntBASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Tpm4Q6IRU2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms